Hi xixus,
The option to let MusicBee "organise files" can only work towards "expected" results,
when the relevant tag information is present in the files!
(For example: sorting files into genre folders can only work if your files have a genre tag.)
It is a very useful feature, but power requires responsibility...
But even if files were moved to wrong places, because tag info was missing,
just let MusicBee auto-tag your files (or probably better do it better manually)
and let it organise again.
That's why a program like MusicBee is so cool, it can sort your files in real folders on your drive,
but from within the program itself it doesn't matter where they are, because it works with
the tags.
Take care of your music collection, tag your files and stay happy
Greetings,
D.