I am really struggling with Single FLAC files in MusicBee... When I play a song and it finishes, the song is given the correct +1 play in "Top Tracks" in Music Explorer view. When I restart MusicBee however and check the artist's tab again it shows either 1 of 2 things. It will show +1 to every track on the album, even though I only played one song. Or it will say 0 for the track that was played. If it says 0, this seems to be a visual bug and restarting MusicBee, clicking to another album artist tab, then back to the one with play seems to correct this.
To add to this issue, I organized my Single FLAC albums into folders using the computer file explorer feature built into MusicBee. I did not use the File Organizer because last time I used it with a Single FLAC it wiped my play counts. All I did this time was make an artist folder and dragged all the albums inside it. No renaming of anything. Sadly, I once again lost all my play counts for every Single FLAC album.
I also lost my track ratings.
foobar2000 does not seem to have any problems recording play counts for a Single FLAC + cuesheet. You can actually manually add play counts to the individual tracks split by the cuesheet. Unfortunately you can't do this in MusicBee with a Single FLAC or I could fix my play counts, though the played date would be n/a now.