Thanks Steven.
I followed the steps and the issue is still happening.
Here are two examples of the file names:
01-Jeff Buckley-Mojo Pin_1 and 01-Jeff Buckley-Mojo Pin
02-Jeff Buckley-Eternal Life_1 and 02-Jeff Buckley-Eternal Life
Here is a link to the zip.
Also, note that I now get an error when I click on the Organisation button on the auto-sweep section of the settings:
MusicBee v3.2.6685.20172 (Win10.0), 22 Apr 2018 19:46:
System.NullReferenceException: Object reference not set to an instance of an object.
at #=zYik3wkPKN3qmxcFFtXsVzqUMGepU1ssENA==.#=zbeiBT64=(List`1 #=zIgebPN4=, Boolean #=zW04lr2rWxZtW)
at #=zVayTggDZCIgUK_LzX5RokApYYLpjY37sZQ==.#=zbeiBT64=(List`1 #=zIgebPN4=, Boolean #=zW04lr2rWxZtW)
at #=zytornnKyodYMG6FAOTzQeVI51xAd.#=zJVsY58eguCM2shDwujPAXTY=(List`1 #=zIgebPN4=, #=z9nRJHJPdggCRTpTQjbqepqrUniPkpO8sWA== #=zT9nSR0$I9PkqD7XAyO7hOCI=, Boolean #=z6ns_LA$Bi7ilv09jgw==)
at #=zytornnKyodYMG6FAOTzQeVI51xAd.#=zedEGwtlEoSDkqMTR5TiUujxb9Oyc(Object #=zyrNMTb8=, EventArgs #=zsdGG_44=)
at System.Windows.Forms.Control.OnClick(EventArgs e)
at #=z4GfAll6PLXnHJ5Vge$fyVjQ=.OnClick(EventArgs #=zsdGG_44=)
at #=z4GfAll6PLXnHJ5Vge$fyVjQ=.#=z59Xxa26juHjz(Object #=zyrNMTb8=, EventArgs #=zsdGG_44=)
at System.Windows.Forms.Control.OnClick(EventArgs e)
at System.Windows.Forms.Button.OnClick(EventArgs e)
at System.Windows.Forms.Button.OnMouseUp(MouseEventArgs mevent)
at System.Windows.Forms.Control.WmMouseUp(Message& m, MouseButtons button, Int32 clicks)
at System.Windows.Forms.Control.WndProc(Message& m)
at System.Windows.Forms.ButtonBase.WndProc(Message& m)
at System.Windows.Forms.Button.WndProc(Message& m)
at System.Windows.Forms.Control.ControlNativeWindow.OnMessage(Message& m)
at System.Windows.Forms.Control.ControlNativeWindow.WndProc(Message& m)
at System.Windows.Forms.NativeWindow.Callback(IntPtr hWnd, Int32 msg, IntPtr wparam, IntPtr lparam)